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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801285.1_cds_XP_016474138.1_6594
CDS Infomation

[gene=LOC107795934] [db_xref=GeneID:107795934] [protein=endoglucanase 17-like isoform X3] [protein_id=XP_016474138.1] [location=join(50019..50168,50369..50569,50683..50775,50918..51079,51196..51307,51417..51580,51677..52009)] [gbkey=CDS]
Sequence

ATGGCATTCACTACCACAATGCTATCATGGAGTGTGATTGAATTTGGTGGACTGATGAAA
GGAGAACTCCAGAATGCAAGACAAGCCATTCGCTGGGCCACTAACTATCTTCTCAAAGCC
ACTGCCTATCCAGACACCATATTTGTTCAGGTGGGGGAAGCAGGAAGTGACCATGCTTGC
TGGGAGAGACCTGAGGATATGGACACCCCAAGAAGTGTATTCAAGATTGACAAAAACACT
CCAGGGACTGAAGTAGCTGCAGAGACCGCTGCTGCTCTTTCTGCTGCTTCTTTAGTCTTC
AGAAAAAGCGATCCCACTTACTCCAACCTCCTTGTGAGGAGGGCCATCAGGGTGTTCGAA
TTTGCGGACAAGTACAGAGGTTCCTATAGCGATGGATTAAAGAATATCGTGTGCCCCTTT
TATTGCTCCTATTCAGGATACCAGGACGAGCTGTTATGGGGTGCTGCTTGGTTACATCGA
GCCACGAAGAACTCTTTTTACCTAAATTATATCCAAAGAAACGGGCAAAACCTTGGGGCC
GACCAGAGTGATAACACATTTTGTTGGGACAACAAGCATGTTGGAGCAAGGATTCTTCTT
TCCAAGGCATTTCTTGTTCAAAAGCTCCAATCTCTCCATGATTACAAGAGTCACGCAGAC
AACTACATTTGCTCCGTCGTCCCAGGGACACCCATGTCTCAAGCACAATATACTCCAGGA
GGGCTACTCTTTACTATGAGTGACAGCAACATGCAATATGTGACGTCAACCTCTTTTCTG
CTGGTAACCTATGCCAAGTACTTGACCTCTGCTCATCTGGCTGTCAATTGTGGTGGCGTT
CTTGTCACGCCAAAAATGCTACGAAATCTTGCCAAAAAGCAGGTGGACTATCTGTTGGGA
GATAATCCATTAAAAATGTCATATATGGTGGGATATGGGACTAGGTACCCGCAGAGGATT
CACCATCGGGGATCGTCTTTGCCATCTATGGTGGTGCACCCAACAAAAATACAATGCTCG
TCGGGGTTCAGCATGTATAATTCTCAGAATCCAAACCCAAATATTCTGGTAGGAGCCGTG
GTTGGTGGACCGGATCAGCATGATAACTTTCCAGACCAGCGCTCAGATTATGAGCAATCG
GAGCCAGCCACTTATATTAATGCCCCGCTGGTTGGATCGCTGGCTTACCTCGCGCACTCG
TTCGGCCAGCTCTAG

Peptide Sequence

PEP ID

XP_016474138.1
PEP Infomation

PREDICTED: endoglucanase 17-like isoform X3 [Nicotiana tabacum]
Sequence

MAFTTTMLSWSVIEFGGLMKGELQNARQAIRWATNYLLKATAYPDTIFVQVGEAGSDHAC
WERPEDMDTPRSVFKIDKNTPGTEVAAETAAALSAASLVFRKSDPTYSNLLVRRAIRVFE
FADKYRGSYSDGLKNIVCPFYCSYSGYQDELLWGAAWLHRATKNSFYLNYIQRNGQNLGA
DQSDNTFCWDNKHVGARILLSKAFLVQKLQSLHDYKSHADNYICSVVPGTPMSQAQYTPG
GLLFTMSDSNMQYVTSTSFLLVTYAKYLTSAHLAVNCGGVLVTPKMLRNLAKKQVDYLLG
DNPLKMSYMVGYGTRYPQRIHHRGSSLPSMVVHPTKIQCSSGFSMYNSQNPNPNILVGAV
VGGPDQHDNFPDQRSDYEQSEPATYINAPLVGSLAYLAHSFGQL

Transcript Sequence

Gene sequence data has not been registered.